STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zbtb46Zinc finger and BTB domain containing 46. (674 aa)    
Predicted Functional Partners:
COL21A1
Collagen type XXI alpha 1 chain.
    
 0.565
pofut1
Protein O-fucosyltransferase 1.
      
 0.550
akap7
Uncharacterized protein.
      
 0.550
epb41l2
Erythrocyte membrane protein band 4.1 like 2.
      
 0.550
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
      
 0.550
ak7
Adenylate kinase 7b.
    
 
 0.533
ABHD1
Abhydrolase domain containing 1.
      
 0.532
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
   0.497
pcsk2
Proprotein convertase subtilisin/kexin type 2; Belongs to the peptidase S8 family.
    
 0.491
RPL36A
Ribosomal protein L36a; Belongs to the eukaryotic ribosomal protein eL42 family.
    
 0.461
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.