STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttll12Tubulin tyrosine ligase-like family, member 12. (623 aa)    
Predicted Functional Partners:
pbdc1
Polysaccharide biosynthesis domain containing 1.
    
   0.666
ttll5
Tubulin tyrosine ligase-like family, member 5.
      
0.602
ttll9
Tubulin tyrosine ligase-like family, member 9.
    
 
0.559
eef1akmt1
EEF1A lysine methyltransferase 1; Protein-lysine methyltransferase that selectively catalyzes the trimethylation of EEF1A at 'Lys-79'; Belongs to the class I-like SAM-binding methyltransferase superfamily. EFM5 family.
    
   0.555
ttll4
Tubulin tyrosine ligase-like family, member 4.
      
0.550
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.549
ttll1
Tubulin tyrosine ligase-like family, member 1.
      
 0.549
ARPC4-TTLL3
ARPC4-TTLL3 readthrough.
      
0.501
nudt14
Nudix (nucleoside diphosphate linked moiety X)-type motif 14.
      
 0.473
srprb
SRP receptor subunit beta.
      
 0.472
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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