STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103458310Galectin. (351 aa)    
Predicted Functional Partners:
LOC103472377
zf-3CxxC domain-containing protein.
   
  
 0.481
LOC103478004
Uncharacterized protein.
    
 0.458
ptprc
Protein tyrosine phosphatase receptor type C.
    
 
 0.432
LOC103466132
CD44 molecule (Indian blood group) b.
   
 
 0.428
lamp1
Lysosomal associated membrane protein 1a.
    
 0.427
ENSPREP00000024840
TIR domain-containing protein.
   
  
 0.409
mertk
C-mer proto-oncogene tyrosine kinase a.
   
 
 0.408
gemin4
Gem (nuclear organelle) associated protein 4.
    
 
 0.403
gpnmb
Glycoprotein (transmembrane) nmb.
   
  
 0.402
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.