STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eya1Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. (621 aa)    
Predicted Functional Partners:
six1
SIX homeobox 1a.
   
 
 0.751
six2
SIX homeobox 2a.
   
 
 0.703
six4
SIX homeobox 4a.
   
 
 0.702
LOC103460487
Fibronectin 1a.
      
 0.566
shisa2
Shisa family member 2b.
      
 0.564
LOC103474648
SIX homeobox 5.
   
 
 0.553
LOC103474650
SIX homeobox 9.
   
 
 0.553
ENSPREP00000014560
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
  
  
 
0.492
LOC103475931
SIX homeobox 7.
   
 
 0.489
Six3
SIX homeobox 3a.
   
 
 0.489
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.