STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prdm14PR domain containing 14. (587 aa)    
Predicted Functional Partners:
cbfa2t2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
   
 0.876
LOC103473609
POU domain protein.
   
 0.695
tet2
Tet methylcytosine dioxygenase 2.
      
 0.681
PRDM6
PR/SET domain 6.
    
 
0.626
Lin28a
CCHC-type domain-containing protein.
   
 0.608
foxp1
Forkhead box P1b.
    
 0.584
lef1
Lymphoid enhancer-binding factor 1.
    
 0.571
runx1t1
RUNX1 partner transcriptional co-repressor 1.
   
 0.568
cbfa2t3
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
 0.568
nanos3
Nanos homolog 3; Belongs to the nanos family.
    
 
 0.564
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.