STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472663Eomesodermin homolog a. (651 aa)    
Predicted Functional Partners:
LOC103471993
T-box transcription factor Ta.
  
 
0.556
LOC103482434
Forkhead box H1.
     
 0.543
tbxt
T-box transcription factor Tb.
   
 
0.532
LOC103473609
POU domain protein.
   
 0.514
tbx21
T-box transcription factor 21.
  
 
0.491
mixl1
Mix paired-like homeobox.
   
 0.478
SNAI2
Snail family transcriptional repressor 2.
    
 0.472
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.457
panx2
Pannexin; Structural component of the gap junctions and the hemichannels; Belongs to the pannexin family.
      
 0.414
MAP2K6
Mitogen-activated protein kinase kinase 6.
   
    0.406
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.