STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Birc6UBIQUITIN_CONJUGAT_2 domain-containing protein. (141 aa)    
Predicted Functional Partners:
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.993
LOC103461037
RAN binding protein 2.
   
 0.977
rps27a
Ribosomal protein S27a.
   
 0.975
ENSPREP00000001588
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.972
LOC103467757
Transmembrane protein 189.
   
 0.972
ube2v2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.972
LOC103465507
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.972
tep1
Uncharacterized protein.
   
 0.970
traf7
TNF receptor-associated factor 7.
    
 0.966
atg7
ATG7 autophagy related 7 homolog (S. cerevisiae).
  
 0.962
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.