STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
clg16h8orf37Uncharacterized protein. (154 aa)    
Predicted Functional Partners:
aff4
AF4/FMR2 family, member 4.
      
 0.616
ptger3
Prostaglandin E receptor 3 (subtype EP3).
      
 0.550
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.549
ofd1
OFD1 centriole and centriolar satellite protein.
      
 0.549
ttc8
Tetratricopeptide repeat domain 8.
      
 0.549
atxn2
Ataxin 2.
      
 0.549
ift172
Intraflagellar transport 172.
      
 0.549
atxn10
Ataxin 10.
      
 0.469
aff1
Uncharacterized protein.
      
 0.459
LOC103481378
LsmAD domain-containing protein.
      
 0.432
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.