STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000027387PP1-binding domain-containing protein. (588 aa)    
Predicted Functional Partners:
kif11
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.885
ttk
Ttk protein kinase.
   
  
 0.862
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.841
LOC103460459
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
  
 0.808
cdca3
Si:ch211-69g19.2.
   
  
 0.804
nuf2
UF2 component of NDC80 kinetochore complex.
   
  
 0.794
ska3
Spindle and kinetochore associated complex subunit 3.
   
  
 0.771
cdc20
Cell division cycle 20 homolog.
   
  
 0.768
LOC103463131
Abnormal spindle microtubule assembly.
   
  
 0.758
pbk
PDZ binding kinase.
   
  
 0.751
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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