STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chst12Carbohydrate sulfotransferase. (415 aa)    
Predicted Functional Partners:
LOC103459210
Decorin; May affect the rate of fibrils formation.
     
 0.667
chst7
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.549
csgalnact2
Hexosyltransferase.
      
 0.545
hykk
Hydroxylysine kinase, tandem duplicate 1.
      
 0.545
chst1
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.535
CHST15
Carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15.
      
 0.476
DSEL
Dermatan sulfate epimerase like a.
      
 0.471
mief1
Mitochondrial elongation factor 1.
      
 0.471
csgalnact1
Hexosyltransferase.
      
 0.468
LOC103466195
Sulfotransferase; Belongs to the sulfotransferase 1 family.
      
 0.468
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.