STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000027466Uncharacterized protein. (233 aa)    
Predicted Functional Partners:
ENSPREP00000025954
Uncharacterized protein.
 
     0.666
ENSPREP00000025971
Uncharacterized protein.
 
    
0.666
ENSPREP00000027539
Uncharacterized protein.
 
    
0.645
wdr18
WD repeat domain 18.
   
 0.577
ENSPREP00000026229
Uncharacterized protein.
 
    
0.565
ENSPREP00000027250
Ig-like domain-containing protein.
 
      0.551
ENSPREP00000026242
Uncharacterized protein.
 
    
0.550
tex10
Testis expressed 10.
   
 0.548
pes1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.519
ENSPREP00000026363
Fibronectin type-III domain-containing protein.
  
     0.497
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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