STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nek1Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (267 aa)    
Predicted Functional Partners:
LOC103471979
Stathmin; Belongs to the stathmin family.
   
 0.694
LOC103478453
Stathmin; Belongs to the stathmin family.
    
 0.685
LOC103460092
Stathmin; Belongs to the stathmin family.
    
 0.685
LOC103478616
Stathmin 2a.
    
 0.651
nek7
NIMA-related kinase 7; Belongs to the protein kinase superfamily.
  
 
0.642
stmn2
Stathmin; Belongs to the stathmin family.
    
 0.566
nek2
NIMA-related kinase 2.
  
 
0.480
plk3
Serine/threonine-protein kinase PLK.
  
0.472
plk2
Serine/threonine-protein kinase PLK.
  
0.472
dlgap5
Discs, large (Drosophila) homolog-associated protein 5.
   
  
 0.465
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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