STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adamts9ADAM metallopeptidase with thrombospondin type 1 motif, 9. (1898 aa)    
Predicted Functional Partners:
lrig1
Leucine-rich repeats and immunoglobulin-like domains 1.
   
  
 0.551
slc25a26
Solute carrier family 25 member 26; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.549
LOC103465037
Solute carrier family 2 member 9, like 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
      
 0.549
psmd6
Proteasome 26S subunit, non-ATPase 6.
      
 0.549
atxn7
Ataxin 7.
      
 0.513
thoc7
THO complex 7.
      
 0.513
prickle2
Prickle homolog 2b.
      
 0.499
pofut2
Protein O-fucosyltransferase 2.
     
 0.419
magi1
Membrane associated guanylate kinase, WW and PDZ domain containing 1b.
      
 0.400
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.