STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metrnMeteorin, glial cell differentiation regulator. (302 aa)    
Predicted Functional Partners:
LOC103472446
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide; Belongs to the 14-3-3 family.
    
 0.700
pou3f2
POU domain protein.
   
  
 0.683
prkdc
Protein kinase, DNA-activated, catalytic subunit; Belongs to the PI3/PI4-kinase family.
    
 0.662
hsp90b1
Heat shock protein 90, beta (grp94), member 1.
    
 0.618
trap1
TNF receptor-associated protein 1.
    
 0.612
hsp90ab1
Heat shock protein 90, alpha (cytosolic), class B member 1.
    
 0.612
LOC103457917
Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.
    
 0.612
HSP90AA1
Heat shock protein 90 alpha family class A member 1.
    
 0.612
tsc1
TSC complex subunit 1b.
    
 0.612
hsbp1
Heat shock factor binding protein 1a.
    
 0.596
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.