STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prr35Si:ch211-248l17.3. (590 aa)    
Predicted Functional Partners:
kcng3
Potassium voltage-gated channel, subfamily G, member 3; Belongs to the potassium channel family.
   
  
 0.553
LOC103464606
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.549
ccdc36
Uncharacterized protein.
      
 0.549
trappc6a
Trafficking protein particle complex 6b-like.
      
 0.549
TOGARAM1
TOG array regulator of axonemal microtubules 1.
      
 0.549
rrp36
Ribosomal RNA processing 36.
      
 0.549
TMEM43
Uncharacterized protein.
      
 0.536
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
      
 0.535
ENSPREP00000002402
Uncharacterized protein.
      
 0.521
pkdcc
Protein kinase domain containing, cytoplasmic b.
      
 0.469
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.