STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARVCFARVCF delta catenin family member b. (975 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
   
 0.836
LOC103476642
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
    
 0.787
LOC103465321
Junction plakoglobin a.
   
 0.717
LOC103471147
Catenin (cadherin-associated protein), alpha 1.
   
 0.695
ctnna2
Catenin (cadherin-associated protein), alpha 2.
   
 0.695
ENSPREP00000028495
Uncharacterized protein.
   
 0.695
LOC103477053
Uncharacterized protein.
   
 0.695
zbtb33
Zinc finger and BTB domain containing 33.
    
 
 0.693
bmp10
Bone morphogenetic protein 10.
      
 0.646
LOC103472282
Uncharacterized protein.
   
 0.635
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.