STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sec61bUncharacterized protein. (69 aa)    
Predicted Functional Partners:
sec61g
SEC61 translocon gamma subunit.
   
 0.999
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.996
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.991
ssr2
Signal sequence receptor, beta.
   
 0.986
ENSPREP00000017181
Uncharacterized protein; Belongs to the SecY/SEC61-alpha family.
   
 0.981
LOC103465235
Plug_translocon domain-containing protein.
   
 0.981
LOC103465071
Plug_translocon domain-containing protein.
   
 0.981
ssr4
Signal sequence receptor, delta.
   
 0.981
ssr3
Signal sequence receptor, gamma.
   
 0.980
sec62
SEC62 homolog, preprotein translocation factor.
    
 
 0.955
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.