STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000027951Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
nr1h3
Nuclear receptor subfamily 1, group H, member 3.
    
 0.849
LOC103471211
Nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor).
   
 0.777
LOC103467002
Nuclear receptor subfamily 1, group H, member 5.
    
 0.748
nr1h4
Nuclear receptor subfamily 1, group H, member 4.
    
 0.748
crebbp
CREB binding protein b.
   
 0.743
LOC103466861
Uncharacterized protein.
    
 0.736
LOC103464934
Vitamin D receptor b.
    
 0.736
ENSPREP00000011180
Nuclear receptor subfamily 5, group A, member 2.
    
 0.735
LOC103475709
Androgen receptor.
    
 0.730
ar
Androgen receptor.
    
 0.730
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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