STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d24TBC1 domain family, member 24. (568 aa)    
Predicted Functional Partners:
LOC103460653
Si:dkey-16l2.16.
    
 0.598
rab35
RAB35, member RAS oncogene family b.
    
 0.598
ift27
Intraflagellar transport 27.
    
 0.548
cdc16
Cell division cycle 16 homolog (S. cerevisiae).
      
 0.439
TBC1D13
TBC1 domain family member 13.
      
 0.420
ENSPREP00000016383
ADP-ribosylation factor 6b.
    
 
 0.407
ENSPREP00000022524
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.407
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.