STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtmr9Myotubularin related protein 9. (549 aa)    
Predicted Functional Partners:
mtmr6
Myotubularin related protein 6.
  
0.812
LOC103473187
Myotubularin related protein 7b.
  
0.792
mtmr7
Myotubularin related protein 7a.
  
0.786
ENSPREP00000005706
Uncharacterized protein.
   
0.777
ccm2
CCM2 scaffold protein.
   
 0.683
LOC103474382
SH3 domain binding glutamate-rich protein.
      
 0.640
lrguk
Leucine-rich repeats and guanylate kinase domain containing.
   
   0.525
LOC103472069
Terminal nucleotidyltransferase 4A.
   
  
 0.483
brd7
Bromodomain containing 7.
      
 0.474
LOC103480150
Myotubularin related protein 1a.
  
 
0.473
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.