STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alox5Arachidonate 5-lipoxygenase a. (673 aa)    
Predicted Functional Partners:
LOC103474609
Cytochrome P450, family 4, subfamily F, polypeptide 3; Belongs to the cytochrome P450 family.
   
 0.919
LOC103471803
Leukotriene C4 synthase.
   
 
 0.918
LOC103463466
Uncharacterized protein.
   
 0.916
LOC103473446
Prostaglandin-endoperoxide synthase 1.
   
 
 0.913
LOC103469906
Prostaglandin-endoperoxide synthase 1.
   
 
 0.913
ptgs2
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.913
pla2g4a
Phospholipase A2.
   
 
 0.913
lta4h
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
     
 0.913
pla2g12b
Phospholipase A2, group XIIB.
   
 0.913
pla2g4c
Zgc:101699.
     
 0.908
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.