HOMER1 protein (Poecilia reticulata) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

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Coexpression

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[Homology]

Score

HOMER1

Homer scaffold protein 1. (377 aa)

Predicted Functional Partners:

LOC103479257

0.869

adora2b

0.679

grm1

0.592

LOC103475526

0.592

LOC103458356

0.592

grm5

0.592

LOC103466031

0.544

shank1

0.533

Shank1

0.533

LOC103463007

0.533

Your Current Organism:

Poecilia reticulata

NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
HOMER1	LOC103458356	ENSPREP00000028360	ENSPREP00000023663	Homer scaffold protein 1.	Glutamate receptor, metabotropic 1b.	0.592
HOMER1	LOC103463007	ENSPREP00000028360	ENSPREP00000023501	Homer scaffold protein 1.	SH3 and multiple ankyrin repeat domains 2a.	0.533
HOMER1	LOC103466031	ENSPREP00000028360	ENSPREP00000021990	Homer scaffold protein 1.	SH3 and multiple ankyrin repeat domains 3a.	0.544
HOMER1	LOC103475526	ENSPREP00000028360	ENSPREP00000019227	Homer scaffold protein 1.	Glutamate receptor, metabotropic 5a.	0.592
HOMER1	LOC103479257	ENSPREP00000028360	ENSPREP00000014781	Homer scaffold protein 1.	WH1 domain-containing protein.	0.869
HOMER1	Shank1	ENSPREP00000028360	ENSPREP00000015974	Homer scaffold protein 1.	SAM domain-containing protein.	0.533
HOMER1	adora2b	ENSPREP00000028360	ENSPREP00000008982	Homer scaffold protein 1.	Adenosine A2b receptor.	0.679
HOMER1	grm1	ENSPREP00000028360	ENSPREP00000003828	Homer scaffold protein 1.	Glutamate receptor, metabotropic 1a.	0.592
HOMER1	grm5	ENSPREP00000028360	ENSPREP00000030358	Homer scaffold protein 1.	Glutamate receptor, metabotropic 5b.	0.592
HOMER1	shank1	ENSPREP00000028360	ENSPREP00000015953	Homer scaffold protein 1.	SH3 and multiple ankyrin repeat domains 1.	0.533
LOC103458356	HOMER1	ENSPREP00000023663	ENSPREP00000028360	Glutamate receptor, metabotropic 1b.	Homer scaffold protein 1.	0.592
LOC103458356	LOC103479257	ENSPREP00000023663	ENSPREP00000014781	Glutamate receptor, metabotropic 1b.	WH1 domain-containing protein.	0.960
LOC103458356	grm1	ENSPREP00000023663	ENSPREP00000003828	Glutamate receptor, metabotropic 1b.	Glutamate receptor, metabotropic 1a.	0.905
LOC103463007	HOMER1	ENSPREP00000023501	ENSPREP00000028360	SH3 and multiple ankyrin repeat domains 2a.	Homer scaffold protein 1.	0.533
LOC103463007	LOC103479257	ENSPREP00000023501	ENSPREP00000014781	SH3 and multiple ankyrin repeat domains 2a.	WH1 domain-containing protein.	0.500
LOC103466031	HOMER1	ENSPREP00000021990	ENSPREP00000028360	SH3 and multiple ankyrin repeat domains 3a.	Homer scaffold protein 1.	0.544
LOC103466031	LOC103479257	ENSPREP00000021990	ENSPREP00000014781	SH3 and multiple ankyrin repeat domains 3a.	WH1 domain-containing protein.	0.500
LOC103475526	HOMER1	ENSPREP00000019227	ENSPREP00000028360	Glutamate receptor, metabotropic 5a.	Homer scaffold protein 1.	0.592
LOC103475526	LOC103479257	ENSPREP00000019227	ENSPREP00000014781	Glutamate receptor, metabotropic 5a.	WH1 domain-containing protein.	0.625
LOC103479257	HOMER1	ENSPREP00000014781	ENSPREP00000028360	WH1 domain-containing protein.	Homer scaffold protein 1.	0.869