STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103479952RAS protein activator like 2. (1155 aa)    
Predicted Functional Partners:
arhgap5
Rho GTPase activating protein 5.
    
 0.570
LOC103475743
Rho GTPase activating protein 35b.
    
 0.570
arhgap35
Uncharacterized protein.
    
 0.570
zcrb1
Zinc finger CCHC-type and RNA binding motif 1.
    
 0.553
rasa1
RAS p21 protein activator (GTPase activating protein) 1a.
     
0.531
nf1
Neurofibromin 1b.
    
 0.519
arhgap22
Rho GTPase activating protein 22.
    
 0.494
LOC103459184
DEF6 guanine nucleotide exchange factor c.
    
 0.494
nek2
NIMA-related kinase 2.
    
 0.467
RASA2
RAS p21 protein activator 2.
    
 0.462
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.