STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankef1Ankyrin repeat and EF-hand domain containing 1a. (781 aa)    
Predicted Functional Partners:
Rsph14
Uncharacterized protein.
   
 
 0.635
tekt3
Tektin 3.
   
   0.623
cfap99
Cilia and flagella associated protein 99.
   
  0.623
LOC103464219
Radial spoke head component 4A.
   
   0.600
LOC103479100
F-box protein 36b.
   
 
  0.596
fbxo36
F-box protein 36a.
   
 
  0.529
LOC103470385
Cilia and flagella associated protein 52.
   
  0.456
wsb2
WD repeat and SOCS box containing 2.
   
  0.456
POC1A
POC1 centriolar protein A.
   
  0.456
wsb1
WD repeat and SOCS box containing 1.
   
  0.456
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.