STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000028517ANK_REP_REGION domain-containing protein. (336 aa)    
Predicted Functional Partners:
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.960
ift81
Intraflagellar transport 81 homolog.
    
 0.926
skp1
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.921
LOC103480695
Protein kinase domain-containing protein.
 
  
 0.915
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.907
ENSPREP00000027150
Uncharacterized protein.
    
 0.903
LOC103469085
Fleer.
    
 0.898
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.890
tep1
Uncharacterized protein.
   
 0.865
LOC103470579
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.865
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.