STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rassf7Ras association domain family member 7a. (467 aa)    
Predicted Functional Partners:
ENSPREP00000008364
Uncharacterized protein.
    
 
 0.415
ENSPREP00000008374
Uncharacterized protein.
    
 
 0.415
ppp1r13l
Protein phosphatase 1, regulatory subunit 13 like.
    
 
 0.415
tp53bp2
Tumor protein p53 binding protein, 2a.
    
 
 0.415
LOC103461786
Uncharacterized protein.
    
 
 0.415
ENSPREP00000027866
Uncharacterized protein.
    
 
 0.415
LOC103461787
Interleukin 10 receptor subunit beta.
    
 
 0.415
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
    
 
 0.415
LOC103470863
Tumor protein p53 binding protein, 2b.
    
 
 0.409
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.