STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chrna2Cholinergic receptor, nicotinic, alpha 2b (neuronal). (555 aa)    
Predicted Functional Partners:
chrna1
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.744
LOC103471384
Cholinergic receptor, nicotinic, beta 3b (neuronal); Belongs to the ligand-gated ion channel (TC 1.A.9) family.
  
0.634
LOC103464222
Cholinergic receptor, nicotinic, beta polypeptide 3a.
  
0.632
LOC103462687
Cholinergic receptor, nicotinic, alpha 5.
  
0.624
LOC103464242
Cholinergic receptor, nicotinic, beta 5a.
  
 
0.573
LOC103471382
Uncharacterized protein.
  
 
0.573
LOC103475776
Cholinergic receptor, nicotinic, epsilon.
  
 
0.573
chrnb1
Cholinergic receptor, nicotinic, beta 1 (muscle).
  
 
0.572
chrng
Cholinergic receptor, nicotinic, gamma.
  
 
0.572
chrnb2
Cholinergic receptor, nicotinic, beta 2.
  
 
0.572
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.