STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103480695Protein kinase domain-containing protein. (356 aa)    
Predicted Functional Partners:
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
    
 0.924
ENSPREP00000028517
ANK_REP_REGION domain-containing protein.
 
  
 0.915
Ankrd45
ANK_REP_REGION domain-containing protein.
    
 0.812
ENSPREP00000003924
ATP-binding cassette, sub-family E (OABP), member 1.
   
 0.713
sec63
SEC63 homolog, protein translocation regulator.
    
 
 0.610
amfr
Autocrine motility factor receptor b.
    
 
 0.563
syvn1
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.563
xbp1
X-box binding protein 1.
    
 0.523
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.504
nbr1
NBR1 autophagy cargo receptor a.
    
 0.459
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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