STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PtafrPlatelet-activating factor receptor; Belongs to the G-protein coupled receptor 1 family. (382 aa)    
Predicted Functional Partners:
LOC103463549
Guanine nucleotide binding protein (G protein), alpha 11a (Gq class).
   
 0.817
LOC103470235
Uncharacterized protein.
   
 0.817
LOC103470237
Guanine nucleotide binding protein (G protein), alpha 14a.
   
 0.817
LOC103463548
Guanine nucleotide binding protein (G protein), alpha 15 (Gq class), tandem duplicate 4.
    
  0.810
LOC103473462
Uncharacterized protein.
    
  0.704
LOC103473463
G protein subunit alpha 14.
    
  0.704
LOC103473464
Guanine nucleotide binding protein (G protein), alpha 14.
    
  0.704
LOC103473465
G protein subunit alpha q.
    
  0.704
ENSPREP00000020316
G protein-coupled receptor 132a; Belongs to the G-protein coupled receptor 1 family.
   
 
0.547
gpr39
G protein-coupled receptor 39; Belongs to the G-protein coupled receptor 1 family.
     
 0.513
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.