STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000028585Macro domain-containing protein. (508 aa)    
Predicted Functional Partners:
ENSPREP00000010946
Poly [ADP-ribose] polymerase.
 
 
   
0.889
ENSPREP00000028525
Uncharacterized protein.
 
      0.888
ENSPREP00000005088
Poly [ADP-ribose] polymerase.
 
     
0.644
ENSPREP00000022539
RING-type domain-containing protein.
 
 
 0.576
ENSPREP00000022586
RING-type domain-containing protein.
 
 
 0.576
LOC103469642
Si:dkey-3h3.3.
 
 
 0.576
LOC103467314
RING-type domain-containing protein.
 
 
 0.576
ifih1
Interferon induced with helicase C domain 1.
   
 
 0.574
LOC103467312
Zgc:66440.
 
 
 0.564
LOC103461817
Uncharacterized protein.
  
 
0.501
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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