STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vtcn1V-set domain containing T cell activation inhibitor 1. (271 aa)    
Predicted Functional Partners:
ENSPREP00000019131
IGv domain-containing protein.
     
  0.900
ENSPREP00000024881
IGv domain-containing protein.
     
 0.655
nt5e
5'-nucleotidase ecto; Belongs to the 5'-nucleotidase family.
   
  
 0.551
rgma
Repulsive guidance molecule BMP co-receptor a.
      
 0.549
cidec
Cell death inducing DFFA like effector c.
      
 0.549
vps36
Vacuolar protein sorting 36 homolog.
      
 0.536
ak5
Adenylate kinase 5; Belongs to the adenylate kinase family.
      
 0.522
cd276
CD276 molecule.
     
0.490
helz2
C3H1-type domain-containing protein.
      
 0.468
ube2i
Ubiquitin-conjugating enzyme E2Ib; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.428
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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