STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103472693Protein S100; Belongs to the S-100 family. (100 aa)    
Predicted Functional Partners:
LOC103466590
Annexin.
   
 0.990
LOC103460119
Annexin.
   
 0.990
ENSPREP00000024506
PDZ domain-containing protein.
   
 0.973
anxa1
Annexin.
   
 0.953
LOC103478173
Protein S100; Belongs to the S-100 family.
  
0.941
hltf
Helicase-like transcription factor.
   
 
 0.894
LOC103473103
Zgc:101785.
   
 0.874
ENSPREP00000024491
Uncharacterized protein.
   
 0.742
ENSPREP00000008580
PDZ domain-containing protein.
   
 0.739
ENSPREP00000028135
Periaxin.
   
 0.739
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.