STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473322Zmp:0000000846. (1739 aa)    
Predicted Functional Partners:
acan
Aggrecan b.
   
 0.784
ENSPREP00000026524
Uncharacterized protein.
   
 0.784
LOC103471589
CD40 ligand; Belongs to the tumor necrosis factor family.
    
   0.711
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
0.648
LOC103458922
Si:dkey-21a6.5.
    
 0.648
itgb6
Integrin beta; Belongs to the integrin beta chain family.
   
0.554
ENSPREP00000018724
Uncharacterized protein.
   
 0.530
LOC103477609
Brevican.
   
 0.530
LOC103472829
Uncharacterized protein.
   
 0.530
itga4
Integrin alpha 4; Belongs to the integrin alpha chain family.
    
 0.514
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.