STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OTOP1Otopetrin 1. (588 aa)    
Predicted Functional Partners:
casr
Calcium-sensing receptor.
      
 0.630
tmem128
Transmembrane protein 107.
 
    
 0.605
slc30a4
Solute carrier family 30 member 4.
   
  
 0.547
otol1
Otolin 1b.
      
 0.545
LOC103479413
Otolin 1a.
      
 0.541
drd3
Dopamine receptor D3; Belongs to the G-protein coupled receptor 1 family.
      
 0.522
drd2
Dopamine receptor D2a; Belongs to the G-protein coupled receptor 1 family.
      
 0.522
ngb
GLOBIN domain-containing protein; Belongs to the globin family.
      
 0.470
tecta
Tectorin alpha.
      
 0.440
rftn2
Raftlin family member 2.
      
 0.440
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.