Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Mrs2 | slc25a28 | ENSPREP00000014125 | ENSPREP00000029032 | Magnesium transporter. | Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.446 |
| abcb10 | slc25a28 | ENSPREP00000015167 | ENSPREP00000029032 | ATP-binding cassette, sub-family B (MDR/TAP), member 10. | Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.434 |
| arih1 | slc25a28 | ENSPREP00000014995 | ENSPREP00000029032 | RBR-type E3 ubiquitin transferase. | Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.486 |
| eif2b3 | iscu | ENSPREP00000003157 | ENSPREP00000032616 | Eukaryotic translation initiation factor 2B, subunit 3 gamma. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.568 |
| eif2b3 | mrpl4 | ENSPREP00000003157 | ENSPREP00000031967 | Eukaryotic translation initiation factor 2B, subunit 3 gamma. | Mitochondrial ribosomal protein L4. | 0.584 |
| eif2b3 | rrp9 | ENSPREP00000003157 | ENSPREP00000005282 | Eukaryotic translation initiation factor 2B, subunit 3 gamma. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.606 |
| eif2b3 | slc25a28 | ENSPREP00000003157 | ENSPREP00000029032 | Eukaryotic translation initiation factor 2B, subunit 3 gamma. | Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.477 |
| fxn | iscu | ENSPREP00000018219 | ENSPREP00000032616 | Frataxin. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.976 |
| fxn | mrpl4 | ENSPREP00000018219 | ENSPREP00000031967 | Frataxin. | Mitochondrial ribosomal protein L4. | 0.559 |
| fxn | slc25a28 | ENSPREP00000018219 | ENSPREP00000029032 | Frataxin. | Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.580 |
| iscu | eif2b3 | ENSPREP00000032616 | ENSPREP00000003157 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Eukaryotic translation initiation factor 2B, subunit 3 gamma. | 0.568 |
| iscu | fxn | ENSPREP00000032616 | ENSPREP00000018219 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Frataxin. | 0.976 |
| iscu | mrpl4 | ENSPREP00000032616 | ENSPREP00000031967 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Mitochondrial ribosomal protein L4. | 0.531 |
| iscu | rrp9 | ENSPREP00000032616 | ENSPREP00000005282 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.550 |
| iscu | slc25a28 | ENSPREP00000032616 | ENSPREP00000029032 | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.481 |
| mettl1 | rrp9 | ENSPREP00000021646 | ENSPREP00000005282 | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein. | 0.520 |
| mettl1 | slc25a28 | ENSPREP00000021646 | ENSPREP00000029032 | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Solute carrier family 25 member 28; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.625 |
| mrpl4 | eif2b3 | ENSPREP00000031967 | ENSPREP00000003157 | Mitochondrial ribosomal protein L4. | Eukaryotic translation initiation factor 2B, subunit 3 gamma. | 0.584 |
| mrpl4 | fxn | ENSPREP00000031967 | ENSPREP00000018219 | Mitochondrial ribosomal protein L4. | Frataxin. | 0.559 |
| mrpl4 | iscu | ENSPREP00000031967 | ENSPREP00000032616 | Mitochondrial ribosomal protein L4. | Iron-sulfur cluster assembly enzyme; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins. | 0.531 |
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