STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGFLAMEGF like, fibronectin type III and laminin G domains. (1067 aa)    
Predicted Functional Partners:
ENSPREP00000025758
Peptidase S72 domain-containing protein.
   
 0.820
dag1
Dystroglycan 1.
   
 0.820
Katnal2
Katanin p60 subunit A-like 2.
    
 
 0.701
LOC103473930
Uncharacterized protein; Belongs to the potassium channel family.
    
 0.698
LOC103470087
Uncharacterized protein.
   
 
 0.689
paip1
Poly(A) binding protein interacting protein 1.
    
 
 0.642
rps27a
Ribosomal protein S27a.
    
  0.614
LOC103471829
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.604
rpl23a
Ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
    
 0.599
CIB2
Calcium and integrin binding family member 2.
    
 0.595
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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