STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103473933EGF-like domain-containing protein. (189 aa)    
Predicted Functional Partners:
ENSPREP00000009268
TGF_BETA_2 domain-containing protein.
    
 0.655
LOC103457781
Left-right determination factor.
   
 0.593
hspa5
Heat shock protein 5; Belongs to the heat shock protein 70 family.
    
 0.582
gdf3
Growth differentiation factor 3.
   
 0.563
egf
Epidermal growth factor.
    
 0.562
LOC103473609
POU domain protein.
   
 0.480
nr6a1
Nuclear receptor subfamily 6, group A, member 1a.
    
 0.468
nodal
Nodal-related 2.
   
 0.460
LOC103470287
Southpaw.
   
 0.460
rmnd5b
Required for meiotic nuclear division 5 homolog B.
    
   0.450
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.