STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
broxBRO1 domain and CAAX motif containing. (410 aa)    
Predicted Functional Partners:
LOC103456856
Charged multivesicular body protein 5b.
    
 0.849
chmp5
Charged multivesicular body protein 5a.
    
 0.849
LOC103468028
Charged multivesicular body protein 4Bb.
   
 0.692
chmp4c
Charged multivesicular body protein 4C.
   
 0.692
LOC103464227
Uncharacterized protein.
   
 0.692
stam2
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2.
   
 
 0.641
tm9sf1
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.580
stam
Signal transducing adaptor molecule (SH3 domain and ITAM motif) 1.
   
 
 0.557
LOC103468818
Charged multivesicular body protein 6a.
    
 0.534
chmp6
Charged multivesicular body protein 6.
    
 0.534
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.