STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
abcd4ATP-binding cassette, sub-family D (ALD), member 4. (617 aa)    
Predicted Functional Partners:
lmbrd1
LMBR1 domain containing 1.
    
 0.917
pex19
Peroxisomal biogenesis factor 19.
    
 0.890
rad51
RAD51 recombinase.
   
 
 0.887
pex3
Peroxisomal biogenesis factor 3.
   
 0.808
rad51d
RAD51 paralog D.
   
 
 0.775
pex16
Peroxisomal membrane protein PEX16.
     
 0.769
pex12
Peroxisome assembly protein 12; Required for protein import into peroxisomes. Belongs to the pex2/pex10/pex12 family.
   
 
 0.726
LOC103460228
ATP-binding cassette, sub-family D (ALD), member 1.
  
0.725
abcd2
ATP-binding cassette, sub-family D (ALD), member 2.
  
0.722
pex14
Peroxisomal biogenesis factor 14.
   
 0.710
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.