STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srek1Splicing regulatory glutamine/lysine-rich protein 1. (171 aa)    
Predicted Functional Partners:
ENSPREP00000029428
RRM domain-containing protein.
 
      0.899
srsf2
Serine and arginine rich splicing factor 2a.
   
 0.764
srrm1
Serine/arginine repetitive matrix 1.
   
 0.725
pnisr
Uncharacterized protein.
   
 
 0.692
srsf10
RRM domain-containing protein.
   
 0.670
rnps1
RNA binding protein S1, serine-rich domain.
   
 0.662
pabpn1
Poly(A) binding protein, nuclear 1.
   
0.662
LOC103464577
RRM domain-containing protein.
   
 0.660
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.660
LOC103473757
Serine and arginine rich splicing factor 9.
   
 0.652
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.