STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466157Si:ch211-236l14.4; Belongs to the glycosyl hydrolase 31 family. (693 aa)    
Predicted Functional Partners:
ENSPREP00000002610
Uncharacterized protein.
   
 0.636
prkcsh
Protein kinase C substrate 80K-H.
   
 0.636
LOC103480661
EF-hand domain-containing protein.
   
 0.636
gnptg
N-acetylglucosamine-1-phosphate transferase subunit gamma.
   
 0.636
LOC103463800
Calmegin.
    
 0.556
canx
Calnexin.
    
 0.556
dnajc10
DnaJ (Hsp40) homolog, subfamily C, member 10.
   
 0.546
gne
Glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase.
  
 
 0.503
gyg1
Glycogenin 1a.
     
 0.444
gyg2
Glycogenin 2.
     
 0.444
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.