STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000029452Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
rps27a
Ribosomal protein S27a.
    
  0.767
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.717
capzb
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.716
LOC103477907
Cbl proto-oncogene C, E3 ubiquitin protein ligase.
    
 0.697
LOC103476312
Uncharacterized protein.
    
 0.697
cbl
Cbl proto-oncogene, E3 ubiquitin protein ligase.
    
 0.697
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.690
LOC103464537
Macrophage stimulating 1 receptor a.
   
 0.690
mst1r
Macrophage stimulating 1 receptor b.
   
 0.690
snap91
Synaptosome associated protein 91a.
  
  
 0.604
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.