STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rad54lRAD54 like. (739 aa)    
Predicted Functional Partners:
rad51
RAD51 recombinase.
  
 
 0.925
rad54b
RAD54 homolog B.
  
  
 
0.906
fancm
Uncharacterized protein.
   
 0.855
rad51d
RAD51 paralog D.
  
 
 0.802
ENSPREP00000026167
F-box DNA helicase 1.
   
 
 0.742
mus81
MUS81 structure-specific endonuclease subunit.
   
 0.734
dmc1
Meiotic recombination protein; May participate in meiotic recombination, specifically in homologous strand assimilation, which is required for the resolution of meiotic double-strand breaks; Belongs to the RecA family. DMC1 subfamily.
  
 
 0.720
blm
BLM RecQ like helicase.
  
 
 0.717
exo1
Exonuclease 1.
   
 0.703
recql4
RecQ helicase-like 4.
  
 
 0.689
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.