Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Arid4a | arid4b | ENSPREP00000005605 | ENSPREP00000011747 | Tudor domain-containing protein. | Translocase of outer mitochondrial membrane 20. | 0.612 |
| Arid4a | begain | ENSPREP00000005605 | ENSPREP00000029474 | Tudor domain-containing protein. | Uncharacterized protein. | 0.716 |
| Arid4a | dmap1 | ENSPREP00000005605 | ENSPREP00000023811 | Tudor domain-containing protein. | DNA methyltransferase 1 associated protein 1. | 0.788 |
| Arid4a | meaf6 | ENSPREP00000005605 | ENSPREP00000014770 | Tudor domain-containing protein. | MYST/Esa1-associated factor 6. | 0.765 |
| Arid4a | ruvbl1 | ENSPREP00000005605 | ENSPREP00000018143 | Tudor domain-containing protein. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.636 |
| ENSPREP00000001027 | LOC103461004 | ENSPREP00000001027 | ENSPREP00000020577 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | 0.978 |
| ENSPREP00000001027 | begain | ENSPREP00000001027 | ENSPREP00000029474 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Uncharacterized protein. | 0.765 |
| ENSPREP00000001027 | gtf2f2 | ENSPREP00000001027 | ENSPREP00000030834 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | 0.978 |
| ENSPREP00000001027 | polr2c | ENSPREP00000001027 | ENSPREP00000004397 | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.994 |
| LOC103461004 | ENSPREP00000001027 | ENSPREP00000020577 | ENSPREP00000001027 | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.978 |
| LOC103461004 | begain | ENSPREP00000020577 | ENSPREP00000029474 | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | Uncharacterized protein. | 0.692 |
| LOC103461004 | polr2c | ENSPREP00000020577 | ENSPREP00000004397 | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | Polymerase (RNA) II (DNA directed) polypeptide C. | 0.968 |
| arid4b | Arid4a | ENSPREP00000011747 | ENSPREP00000005605 | Translocase of outer mitochondrial membrane 20. | Tudor domain-containing protein. | 0.612 |
| arid4b | begain | ENSPREP00000011747 | ENSPREP00000029474 | Translocase of outer mitochondrial membrane 20. | Uncharacterized protein. | 0.716 |
| arid4b | dmap1 | ENSPREP00000011747 | ENSPREP00000023811 | Translocase of outer mitochondrial membrane 20. | DNA methyltransferase 1 associated protein 1. | 0.788 |
| arid4b | meaf6 | ENSPREP00000011747 | ENSPREP00000014770 | Translocase of outer mitochondrial membrane 20. | MYST/Esa1-associated factor 6. | 0.765 |
| arid4b | ruvbl1 | ENSPREP00000011747 | ENSPREP00000018143 | Translocase of outer mitochondrial membrane 20. | RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. | 0.636 |
| begain | Arid4a | ENSPREP00000029474 | ENSPREP00000005605 | Uncharacterized protein. | Tudor domain-containing protein. | 0.716 |
| begain | ENSPREP00000001027 | ENSPREP00000029474 | ENSPREP00000001027 | Uncharacterized protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.765 |
| begain | LOC103461004 | ENSPREP00000029474 | ENSPREP00000020577 | Uncharacterized protein. | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | 0.692 |
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