STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcnpPEST proteolytic signal containing nuclear protein. (183 aa)    
Predicted Functional Partners:
nppc
Natriuretic peptide C.
      
 0.672
med30
Mediator complex subunit 30.
      
 0.553
cct6a
Chaperonin containing TCP1, subunit 6A (zeta 1).
      
 0.553
LOC103468997
Solute carrier family 25 member 39; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.553
dtymk
Deoxythymidylate kinase (thymidylate kinase).
      
 0.553
caprin1
Cell cycle associated protein 1b.
      
 0.553
LOC103462434
Cell cycle associated protein 1a.
      
 0.553
cct8
Chaperonin containing TCP1, subunit 8 (theta).
      
 0.549
clg9h12orf65
Si:ch211-275j6.5.
      
 0.549
exosc3
Exosome component 3.
      
 0.531
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.