STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aqp10Aquaporin 10b; Belongs to the MIP/aquaporin (TC 1.A.8) family. (295 aa)    
Predicted Functional Partners:
gpd2
Glycerol-3-phosphate dehydrogenase 2 (mitochondrial).
 
  
 0.625
gk5
Glycerol kinase 5; Belongs to the FGGY kinase family.
 
 
 0.608
aqp8
Uncharacterized protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
  
0.604
LOC103469806
Bone morphogenetic protein 3.
   
  
 0.599
nedd4
E3 ubiquitin-protein ligase.
      
 0.597
agrn
Agrin.
   
  
 0.594
wtap
WT1 associated protein.
    
   0.585
exosc8
Exosome component 8.
    
   0.585
ppp1r21
Protein phosphatase 1, regulatory subunit 21.
    
   0.585
npm3
Nucleophosmin/nucleoplasmin, 3.
      
 0.571
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.