STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPREP00000029577Erythrocyte membrane protein band 4.1a. (554 aa)    
Predicted Functional Partners:
ENSPREP00000029505
4_1_CTD domain-containing protein.
 
   
  0.907
ENSPREP00000031260
Uncharacterized protein.
 
 
    0.770
LOC103475843
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.694
cask
Uncharacterized protein; Belongs to the MAGUK family.
   
 0.694
ENSPREP00000032303
Uncharacterized protein.
 
      0.691
ptpn2
Tyrosine-protein phosphatase non-receptor type.
 
      0.613
LOC103472442
Tyrosine-protein phosphatase non-receptor type.
 
      0.602
mpp1
Membrane protein, palmitoylated 1; Belongs to the MAGUK family.
 
 
 0.485
epb41l5
Erythrocyte membrane protein band 4.1 like 5.
     
0.415
LOC103474260
Cell adhesion molecule 1b.
    
 
 0.410
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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