STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108166764Zmp:0000001301. (385 aa)    
Predicted Functional Partners:
ENSPREP00000004746
V-SNARE coiled-coil homology domain-containing protein.
     
 0.716
rhobtb3
Si:dkey-6b12.5.
   
 0.536
vps53
VPS53 subunit of GARP complex.
     
 0.525
vti1a
Vesicle transport through interaction with t-SNAREs 1A.
   
 
  0.513
ENSPREP00000006443
Uncharacterized protein.
    
  0.510
LOC103463614
Perilipin; Belongs to the perilipin family.
    
  0.510
plin2
Perilipin; Belongs to the perilipin family.
    
  0.510
timm21
Uncharacterized protein.
   
    0.502
GCC2
GRIP domain-containing protein.
   
 
  0.501
drg1
Developmentally regulated GTP binding protein 1.
    
   0.476
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.