STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103467973Solute carrier family 11 member 2. (559 aa)    
Predicted Functional Partners:
SLC11A2
Solute carrier family 11 member 2.
  
  
 
0.901
slc30a9
Solute carrier family 30 member 9.
   
 
 0.572
aasdh
Aminoadipate-semialdehyde dehydrogenase.
      
 0.531
sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
      
 0.528
mocs1
Molybdenum cofactor synthesis 1.
     
 0.511
ccs
Copper chaperone for superoxide dismutase.
     
 0.510
LOC103471208
Nedd4 family interacting protein 1.
   
 
 0.491
ndfip1
Nedd4 family interacting protein 1, like.
   
 
 0.491
ndfip2
Nedd4 family interacting protein 2.
   
 
 0.491
acp1
Acid phosphatase 1.
     
 0.473
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.