STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103466773Uncharacterized protein. (102 aa)    
Predicted Functional Partners:
eci2
Enoyl-CoA delta isomerase 2.
  
 0.963
LOC103473119
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
  
 0.929
hsdl2
Hydroxysteroid dehydrogenase like 2.
  
 0.890
hadh
Hydroxyacyl-CoA dehydrogenase.
  
 0.873
cryl1
Crystallin, lambda 1.
  
 0.869
pex7
Peroxisomal biogenesis factor 7.
   
 0.809
scp2
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.755
LOC103464006
Sterol carrier protein 2b.
  
 0.755
ECHDC1
Ethylmalonyl-CoA decarboxylase 1.
  
 0.736
LOC103482491
Zgc:101569; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.736
Your Current Organism:
Poecilia reticulata
NCBI taxonomy Id: 8081
Other names: Acanthophacelus reticulata, P. reticulata, Poecilia (Acanthophacelus) reticulata, Poecilia latipinna reticulata, guppy
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